Information for 3-ACACGCCTCA (Motif 19)

G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
Reverse Opposite:
A C G T T A C G C G T A T A C G A C T G G T A C A C T G A C G T C T A G A C G T
p-value:1e-12
log p-value:-2.944e+01
Information Content per bp:1.853
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.6 +/- 22.2bp
Average Position of motif in Background48.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----ACACGCCTCA-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ACACGCCTCA
-CACGCA---
 G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACACGCCTCA
GGCACGCGTC-
 A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACACGCCTCA---
TTCACGCATGAGTT
 A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACACGCCTCA
CAAGACGCCTTA
 A C G T A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACACGCCTCA---
AAGCATACGCCCAACTT
 A C G T A C G T A C G T A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACACGCCTCA
GCCACGCCCCC
 A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

PAX1/MA0779.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACACGCCTCA-----
CGTCACGCATGACTGCA
 A C G T A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACACGCCTCA-
GTGCCACGCGACTG
 A C G T A C G T A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

KLF16/MA0741.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACACGCCTCA
GCCACGCCCCC
 A C G T G T C A G A T C C G T A A G T C A C T G A G T C A T G C A C G T A G T C G T C A
T C A G G T A C G T A C T G C A G T A C C T A G G T A C T A G C G A T C G T A C G A T C