Information for 7-AGACKGAACTYCGCCT (Motif 10)

G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
Reverse Opposite:
C T G A T C A G A C T G A G T C A C T G T C G A G T C A A C T G A C G T A C G T A G T C G T A C A T C G C G A T A G T C C A G T
p-value:1e-14
log p-value:-3.337e+01
Information Content per bp:1.749
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.5 +/- 20.6bp
Average Position of motif in Background41.4 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGACKGAACTYCGCCT
----GGAAATTCCC--
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
----GGAAATCCCC--
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
----GGAAATTCCC--
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT---
-------GCTCCGCCCMCY
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
----GGGAAATCCCCN
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT--
--------TTCCCCCTAC
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
----GGAAANCCCC--
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
-RCCGGAAGTD-----
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.47
Offset:7
Orientation:forward strand
Alignment:AGACKGAACTYCGCCT
-------AGCGCGCC-
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGACKGAACTYCGCCT
---GGGGATTCCCCC-
 G C T A C T A G C G T A A T G C C A T G A C T G T C G A G T C A T G A C A C G T A G C T A G T C C T A G A G T C A G T C A G C T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T