Information for 1-AATATGGCGG (Motif 1)

T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G
Reverse Opposite:
T A G C A T G C T A C G A T G C A T G C T G C A G A C T C G T A C A G T A G C T
p-value:1e-21
log p-value:-4.953e+01
Information Content per bp:1.549
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif16.48%
Number of Background Sequences with motif3126.5
Percentage of Background Sequences with motif6.91%
Average Position of motif in Targets48.9 +/- 24.6bp
Average Position of motif in Background49.5 +/- 36.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:AATATGGCGG--
-TAATGGCGGNC
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATATGGCGG-------
AAAAATGGCGCCATTTTT
 A C G T T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATATGGCGG----
--BTKGGCGGGAAA
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F2/MA0864.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATATGGCGG------
AAAATGGCGCCATTTT
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATATGGCGG-----
ATAAGGGCGCGCGAT
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AATATGGCGG-----
-----GGCGGGAAAH
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AATATGGCGG-----
----GGGCGGGAAGG
 T C G A G T C A G C A T C T G A A C G T T A C G T A C G A T G C T A C G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G