Information for 9-CTGTGAGGKA (Motif 20)

A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
Reverse Opposite:
A G C T G T C A A G T C A G T C A C G T A G T C C G T A A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.114e+01
Information Content per bp:1.909
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets60.6 +/- 30.3bp
Average Position of motif in Background39.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTGTGAGGKA
GCTGTG-----
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGGKA
CCTTTGAWGT-
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGGKA
CCTTTGATGT-
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGAGGKA
GCTGTCAA---
 A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CTGTGAGGKA
TNTCCTGCTGTGNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAGGKA
AGGTGTGA----
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGAGGKA
TNCCTTTGATGT-
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAGGKA
AGGTGTGA----
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTGTGAGGKA
--ATGACGTA
 A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CTGTGAGGKA
VGCTGWCAVB--
 A C G T A C G T A G T C A C G T A C T G A C G T A C T G C G T A A C T G C T A G A C G T C T G A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T