Information for 7-GCAGCAGCGTCTC (Motif 16)

A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
Reverse Opposite:
A C T G C G T A C T A G C G T A T A G C C T A G A T G C A C G T C A T G A G T C A G C T A C T G A T G C
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.772
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif62.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.5 +/- 18.7bp
Average Position of motif in Background46.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCAGCAGCGTCTC
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCGTCTC
CGCAGCTGCG----
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGCGTCTC
AGCAGCTGCTNN--
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCGTCTC
AGCAGCTGCT----
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGCAGCGTCTC
GCAGCTGTNN---
 A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGCGTCTC
TGCAGCTGTCCCT-
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGCAGCGTCTC
NCAGCTGCTG---
 A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGCGTCTC-
GTCWGCTGTYYCTCT
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGCGTCTC
ANCAGCTG------
 A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGCGTCTC
NNGCAGCTGTC----
 A C G T A C G T A T C G A G T C C T G A A C T G G A T C G T C A A T C G A G T C A T C G C G A T A G T C G C A T A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T