Information for 3-CGGCGGCACT (Motif 12)

A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
Reverse Opposite:
C T G A A T C G G A C T A T C G T A G C T G A C A C T G A T G C A T G C C T A G
p-value:1e-11
log p-value:-2.717e+01
Information Content per bp:1.721
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.64%
Number of Background Sequences with motif1087.7
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets52.0 +/- 27.6bp
Average Position of motif in Background50.7 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGGCGGCACT---
AGCTCGGCGCCAAAAGC
 A C G T A C G T A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGGCGGCACT---
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGGCGGCACT
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGCGGCACT-
-GGCGGGAAAH
 A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGCGGCACT
BTKGGCGGGAAA
 A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGCGGCACT
GGGCGGGACC
 A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGGCACT--
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGCGGCACT---
---MRSCACTYAA
 A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CGGCGGCACT
CWGGCGGGAA-
 A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGCGGCACT
TTTGGCGCCAAA
 A C G T A C G T A G T C T A C G A T C G G T A C A C T G A T C G A T G C C T G A A T G C G A C T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A