Information for 18-AMAATCTCMTCTCAGA (Motif 25)

C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
Reverse Opposite:
A C G T T G A C C G A T A T C G C G T A C T A G C T G A C A G T C T A G G C T A A T C G C G T A A G C T C G A T C A G T C G A T
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.737
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.7 +/- 19.3bp
Average Position of motif in Background57.0 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AMAATCTCMTCTCAGA
CAAATCACTG------
 C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AMAATCTCMTCTCAGA
-AAATCACTGC-----
 C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T A C G T A C G T A C G T

GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AMAATCTCMTCTCAGA-----
-AGATSTNDNNDSAGATAASN
 C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A A C T G C G T A A C G T A T C G C A G T T A G C C G T A T C G A G T A C C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A T C G G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AMAATCTCMTCTCAGA
ACAAAGGNBCCT----
 C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AMAATCTCMTCTCAGA
-AAATCACAGCA----
 C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AMAATCTCMTCTCAGA
GACAATGNN--------
 A C G T C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----AMAATCTCMTCTCAGA
AATGAACAATGGAATT-----
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AMAATCTCMTCTCAGA
AACAAT-----------
 A C G T C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AMAATCTCMTCTCAGA
AGAAATGACTTCCCT--
 A C G T C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AMAATCTCMTCTCAGA
NAACAAT-----------
 A C G T A C G T C G T A G T C A C G T A C T G A A C G T A T G C C A G T A G T C G T C A A G C T A G T C A C G T A T G C C G T A A C T G G T C A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T