Information for 9-CASAGACKWGGAK (Motif 24)

A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A G T C C G A T G T C A A C T G A C G T A G T C C G A T A T G C A C G T A C T G
p-value:1e-9
log p-value:-2.240e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 25.7bp
Average Position of motif in Background59.5 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CASAGACKWGGAK------
---CTACTAGGATGTNNTN
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CASAGACKWGGAK
-CCAGACRSVB--
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CASAGACKWGGAK
-BCAGACWA----
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CASAGACKWGGAK--
NNAGGGACAAGGGCNC
 A C G T A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CASAGACKWGGAK
-ANAGATAAGAA-
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CASAGACKWGGAK
-CCAGACAG----
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CASAGACKWGGAK
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CASAGACKWGGAK
---ACACGTGGC-
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CASAGACKWGGAK
-------GTGGAT
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CASAGACKWGGAK
CACAGN-------
 A G T C C G T A A T C G C G T A A C T G G T C A A G T C A C G T C G T A A C T G A C T G C G T A A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T