Information for 3-GCCGCCATCTTGG (Motif 4)

C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
Reverse Opposite:
A T G C T G A C C G T A C T G A T A C G C G T A C G A T A C T G A C T G G T A C A T C G A C T G G T A C
p-value:1e-21
log p-value:-4.946e+01
Information Content per bp:1.775
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif211.1
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets50.2 +/- 25.3bp
Average Position of motif in Background55.1 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGG
GCCGCCATCTTG-
 C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:GCCGCCATCTTGG
GCNGCCATCTTG-
 C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCATCTTGG
GTCCGCCATTA---
 A C G T C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGG
---GCCATCTGTT
 C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCATCTTGG---
CCNNACCATCTGGCCTN
 A C G T C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCCGCCATCTTGG
AAAATGGCGCCATTTT--
 A C G T A C G T A C G T A C G T A C G T C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCCGCCATCTTGG
TACGCCCCGCCACTCTG-
 A C G T A C G T A C G T A C G T A C G T C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCGCCATCTTGG
---ACCATCTGTT
 C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCCGCCATCTTGG
---ACCATATGGT
 C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A T C G G A C T

E2F3/MA0469.2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GCCGCCATCTTGG
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G T A C T A G C A C T G A G T C A G T C G C T A A C G T A T G C A G C T A C G T A C T G T A C G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T