Information for 24-TGGATTTCCTCCS (Motif 22)

A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G C T A G T G C A C T A G A C T G C G T A C G T A G C T A C G A T A G T C A G T C C G T A
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.799
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif24.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets38.7 +/- 23.5bp
Average Position of motif in Background53.8 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGATTTCCTCCS
GGGGATTTCC----
 A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGGATTTCCTCCS
GGGAATTTCC----
 A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGGATTTCCTCCS
GGGGATTTCC----
 A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGATTTCCTCCS
GGGGATTCCCCC-
 A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGATTTCCTCCS------
--AAATTCCCCCCGGAAGT
 A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGATTTCCTCCS
NGGGGATTTCCC---
 A C G T A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGGATTTCCTCCS--
TAGTATTTCCGATCTT
 A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGGATTTCCTCCS
-NNAYTTCCTGHN
 A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGATTTCCTCCS
NCTGGAATGC-----
 A C G T A C G T A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGATTTCCTCCS
---ATTTCCTGTN
 A C G T A C T G C T A G C G T A C G A T A C G T A C G T A G T C A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G