Information for 20-AGGTCACGTGAGG (Motif 19)

C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
Reverse Opposite:
G A T C G T A C C A G T A T G C C T G A A G T C T A C G A C G T A C T G C T G A A G T C A G T C G A C T
p-value:1e-9
log p-value:-2.224e+01
Information Content per bp:1.654
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif147.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets47.4 +/- 25.5bp
Average Position of motif in Background51.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
-GGTCACGTGGC-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACGTGAGG
CCGGTCACGTGA--
 A C G T C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:AGGTCACGTGAGG
-GGTCACGTGA--
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGGTCACGTGAGG
-GGTCACGTGC--
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:5
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGGTCACGTGAGG
-GGTCACGTGG--
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
--GTCACGTGNT-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
--GTCACGTGAT-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
-GGTCACATGAC-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
--GTCACGTGAN-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:10
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:AGGTCACGTGAGG
--GTCACGTGAC-
 C T G A A C T G T C A G A G C T A G T C G T C A A T G C C T A G A G C T T A C G G C T A A C T G C T A G
A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T