Information for 6-CAMYSMGCCRGYCAGT (Motif 11)

A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
Reverse Opposite:
C G T A A G T C C G A T A C T G C T A G A G T C A G C T A C T G T C A G A T G C C A T G A T C G C T A G A C T G A G C T A C T G
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.826
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.9 +/- 19.3bp
Average Position of motif in Background45.8 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAMYSMGCCRGYCAGT
TACGCCCCGCCACTCTG-
 A C G T A C G T A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT--
------GSCTGTCACTCA
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT
AAATGGACCAATCAG-
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT
---SCTGTCAVTCAV-
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CAMYSMGCCRGYCAGT
-------CCAGACAG-
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT
-AGCGCGCC-------
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT---
--CAAATCCAGACATCACA
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CAMYSMGCCRGYCAGT
--AGGTGNCAGACAG-
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:CAMYSMGCCRGYCAGT---
---------TGGCAGTTGN
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CAMYSMGCCRGYCAGT---
-------NCTGTCAATCAN
 A G T C C T G A G T A C A G T C A T G C G T A C A T C G A G T C A G T C C T G A C T A G A G T C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A