Information for 15-YGGGAMTTGTAGT (Motif 23)

G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A A G T C C T G A G C T A C A T G A C G T A G T C A G T C A G T C C T A G
p-value:1e-6
log p-value:-1.571e+01
Information Content per bp:1.827
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif72.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets52.2 +/- 24.2bp
Average Position of motif in Background45.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT
-GGGAATTGTAGT
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------YGGGAMTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------YGGGAMTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT----
-GNNATTTGTCGTAANN
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT---
----NNHTGTGGTTWN
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT---
------CTGTGGTTTN
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT-----
---GTNTTGTTGTGANNT
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:YGGGAMTTGTAGT--
-----NNTGTGGTTT
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:YGGGAMTTGTAGT--
-----GCTGTGGTTT
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:YGGGAMTTGTAGT
---CCATTGTTNY
 G A T C A C T G A C T G C T A G G T C A G T A C C G A T A G C T A C T G A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T