Information for 5-WGGGWRATSSWGTYYT (Motif 16)

C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
Reverse Opposite:
G T C A C T A G T C G A C G T A A G T C G C T A A T G C A T G C C G T A C G A T A G T C G C A T A G T C A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.234e+01
Information Content per bp:1.787
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.2 +/- 26.8bp
Average Position of motif in Background55.0 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WGGGWRATSSWGTYYT
-GGGAATTGTAGT---
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------WGGGWRATSSWGTYYT
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------WGGGWRATSSWGTYYT
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGGGWRATSSWGTYYT
-GGGTCAACGAGTTCA
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:WGGGWRATSSWGTYYT-
-AGNACAGNCTGTTCTN
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WGGGWRATSSWGTYYT-
-AGNACANNNTGTNCTN
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGGGWRATSSWGTYYT-
NGGAACATNATGTACCC
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:WGGGWRATSSWGTYYT-
GGGAACATTGTGTTCCC
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WGGGWRATSSWGTYYT-
--GRACAGWMTGTYCTB
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T A C G T
A C G T A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WGGGWRATSSWGTYYT
VAGRACAKNCTGTBC-
 C G A T A C T G C T A G C T A G C G A T C T A G C G T A A C G T A T C G A T C G C G A T A C T G A C G T A G C T A G T C A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T