Information for 8-ACAATAATCATGA (Motif 9)

C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A C G A T A T C G C G T A A C G T G C A T T C G A A G C T A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.802
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.9 +/- 27.9bp
Average Position of motif in Background52.8 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAATCATGA-
AACAATGNTATTGTT
 A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAATCATGA
GACAATGNN-----
 A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATAATCATGA
NNNTAACAATTATAN---
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAATAATCATGA
RNAACAATGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ACAATAATCATGA
TAGTGAACAATAGATTT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACAATAATCATGA
TTTAGAACAATAAAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAATAATCATGA
AACAAT--------
 A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACAATAATCATGA
TTAAGAACAATAAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACAATAATCATGA
AATGAACAATGGAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------ACAATAATCATGA
NNTNANAACAATTNNA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T G A A C G T C G T A T C G A A C G T A T G C C G T A A C G T A C T G C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T A C G T A C G T