Information for 6-CCCTCTACHAACA (Motif 7)

A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G C T C A G T A T C G A C G T C G T A A C T G C G T A A C T G A C T G T C A G
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.3 +/- 15.1bp
Average Position of motif in Background61.1 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTACHAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCCTCTACHAACA-
--SCCTAGCAACAG
 A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTACHAACA
NNAGTCCCACTCNNNN--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTACHAACA
TTCCCCCTAC-----
 A C G T A C G T A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCTCTACHAACA
NSCACTYVAV---
 A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CCCTCTACHAACA------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCCTCTACHAACA--
---WWTRTAAACAVG
 A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCCTCTACHAACA--
---TCTAAAAATAGA
 A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCCTCTACHAACA--
---ACTATAAATAGA
 A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTACHAACA
AASCACTCAA----
 A C G T A G T C A G T C A G T C C G A T A G T C A C G T G T C A T A G C G C T A T C G A C G T A A G T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T