Information for 5-TATATATGCTTTA (Motif 5)

A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C T G A A T C G A G T C G T C A C G A T C G T A A C G T C T G A A C G T C G T A
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.844
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.1 +/- 28.5bp
Average Position of motif in Background60.5 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TATATATGCTTTA
ATGGGATATATCCGCCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATATATGCTTTA
--TRTTTACTTW-
 A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TATATATGCTTTA
AAGATATCCTT--
 A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TATATATGCTTTA
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TATATATGCTTTA
NNNNNNCTTTTATAN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TATATATGCTTTA
NNAATTTTATTGGNTN--
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TATATATGCTTTA
CCATATATGG----
 A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATATATGCTTTA
TTCATTTGCATAT
 A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TATATATGCTTTA
NANTTATATATAANGN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TATATATGCTTTA
AYATGYATATGCATR-
 A C G T A C G T A C G T A C G T G T C A A G C T C G T A A C G T C G T A A C G T A C T G A T G C A G C T A C G T A C G T C G T A
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G A C G T