Information for 4-TTGATCCCACTTC (Motif 9)

A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
Reverse Opposite:
C A T G C T G A C G T A A C T G A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A G T C A
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.4 +/- 26.5bp
Average Position of motif in Background48.1 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGATCCCACTTC---
NNAGTCCCACTCNNNN
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTGATCCCACTTC
ATAATCCC-----
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCCCACTTC
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCCCACTTC
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCCCACTTC
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCCCACTTC
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTGATCCCACTTC
GATAATTAATCCCTCTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTGATCCCACTTC
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATCCCACTTC
NANANTTAATCCCNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGATCCCACTTC
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C G T C A A G T C A C G T A G C T G T A C
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T