Information for 3-ACAGCCACGGAAT (Motif 7)

C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
Reverse Opposite:
G T C A G C A T A G C T G T A C G T A C C T A G C G A T C T A G C A T G A G T C A C G T A C T G A G C T
p-value:1e-11
log p-value:-2.713e+01
Information Content per bp:1.796
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.1 +/- 19.1bp
Average Position of motif in Background54.6 +/- 34.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCCACGGAAT
CACAGN--------
 A C G T C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCCACGGAAT
BCAGACWA-----
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACAGCCACGGAAT
AGCAACAGCCGCACC--
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGCCACGGAAT
--AGTCACGC---
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAGCCACGGAAT---
TAAGCCACTTAACATT
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACAGCCACGGAAT
CCAGACRSVB---
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACAGCCACGGAAT---
CTTAACCACTTAAGGAT
 A C G T C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ACAGCCACGGAAT
CCAACTGCCA------
 A C G T A C G T A C G T C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACAGCCACGGAAT
GCGACCACCGAA-
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACAGCCACGGAAT
-CRCCCACGCA--
 C T G A A G T C C G T A C T A G G A T C A G T C C G T A A G T C A C T G A C T G C T G A C G T A A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T