Information for 18-CTGTTDGABTTGG (Motif 35)

A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C T G C A C G T A T A C G A G C T A G T C G A C T C G T A C G T A A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.5 +/- 20.1bp
Average Position of motif in Background46.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGTTDGABTTGG--
NNTGTTTATTTTGGCA
 A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTDGABTTGG
BRRCVGTTDN------
 A C G T A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTTDGABTTGG
GCTGTG--------
 A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGTTDGABTTGG
TGGCAGTTGG------
 A C G T A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTDGABTTGG
NNCTTTGTTTTGNTNNN
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTDGABTTGG---
NSTGTTTRCWCAGBNNN
 A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CTGTTDGABTTGG
CACGGCAGTTGGTNN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTDGABTTGG
NNNTGTTGTTGTTNG
 A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGTTDGABTTGG
-TGTTTATTT---
 A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGTTDGABTTGG
GGCVGTTR-------
 A C G T A C G T A G T C C G A T A C T G A C G T A C G T C G T A A C T G C T G A A G T C A C G T A C G T A C T G A C T G
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T