Information for 15-AGCCATCATTGTG (Motif 27)

G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C T G A C G T A A C G T A C T G C G T A C G A T C T A G A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 24.2bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AGCCATCATTGTG
----CTCATTGTC
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCCATCATTGTG----
--NNNCCATTGTGTNAN
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCCATCATTGTG
AGGVNCCTTTGT-
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGCCATCATTGTG--
-----CCWTTGTYYB
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.61
Offset:6
Orientation:forward strand
Alignment:AGCCATCATTGTG
------CTTTGT-
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCCATCATTGTG----
--CTATAATTGTTAGCG
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCCATCATTGTG
GYCATCMATCAT----
 A C G T A C G T A C G T G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGCCATCATTGTG--
-----CCATTGTTYB
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGCCATCATTGTG-
----NCCATTGTTY
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AGCCATCATTGTG--
-----CCATTGTTNY
 G T C A A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C G T A G C T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T