p-value: | 1e-8 |
log p-value: | -2.017e+01 |
Information Content per bp: | 1.937 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.76% |
Number of Background Sequences with motif | 3.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 45.3 +/- 15.7bp |
Average Position of motif in Background | 49.8 +/- 19.5bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0091.1_Zbtb3_1/Jaspar
Match Rank: | 1 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATGCAGTYTGCT- NNNANTGCAGTGCNNTT |
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OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGCAGTYTGCT- WYATGCATWATGCAT |
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PB0146.1_Mafk_2/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGCAGTYTGCT- CCTTGCAATTTTTNN |
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OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 4 |
Score: | 0.52 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CATGCAGTYTGCT- TCATGAATWATTCAT |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 5 |
Score: | 0.52 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CATGCAGTYTGCT ----CTGTCTGG- |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.52 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CATGCAGTYTGCT --VBSYGTCTGG- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 7 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CATGCAGTYTGCT ----TWGTCTGV- |
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RUNX2/MA0511.2/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CATGCAGTYTGCT -TTGCGGTTT--- |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 9 |
Score: | 0.51 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CATGCAGTYTGCT CCTGCTGAGH--- |
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PB0207.1_Zic3_2/Jaspar
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CATGCAGTYTGCT NNTCCTGCTGTGNNN- |
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