Information for 12-TTTCTGGCTGAGAGGA (Motif 20)

A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C C A G T G T A C G A C T A G T C C T G A A T C G T G A C A G T C G C T A C T A G G C T A G T C A T C G A
p-value:1e-9
log p-value:-2.218e+01
Information Content per bp:1.698
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.4 +/- 23.2bp
Average Position of motif in Background53.5 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTCTGGCTGAGAGGA
TCNCCTGCTGNGNNN-
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTCTGGCTGAGAGGA
TNTCCTGCTGTGNNG-
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTCTGGCTGAGAGGA
---TWGTCTGV-----
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TTTCTGGCTGAGAGGA
---CCTGCTGAGH---
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTTCTGGCTGAGAGGA
---CTGTCTGG-----
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:TTTCTGGCTGAGAGGA---
---------GGGAGGACNG
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTCTGGCTGAGAGGA
NNTCCTGCTGTGNNN-
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TTTCTGGCTGAGAGGA
----NGCGTGGGCGGR
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TTTCTGGCTGAGAGGA-
------CTTGAGTGGCT
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TTTCTGGCTGAGAGGA
------GCTGTG----
 A C G T A C G T C G A T A G T C C G A T A C T G A C T G A T G C A G C T A C T G C T G A A C T G G C T A C T A G A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T