Information for 10-CTGGCYCTTCYSYCTG (Motif 13)

A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
Reverse Opposite:
A T G C C G T A A T C G C T G A A T C G C T A G T A C G T G C A C T G A T C A G C T G A C A T G T A G C A G T C C G T A A T C G
p-value:1e-10
log p-value:-2.525e+01
Information Content per bp:1.641
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.57%
Number of Background Sequences with motif417.3
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets52.5 +/- 24.7bp
Average Position of motif in Background50.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCYCTTCYSYCTG
GYCTGGYYTNTGTCA---
 A C G T A C G T A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTGGCYCTTCYSYCTG
GGTCTGGCAT---------
 A C G T A C G T A C G T A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGGCYCTTCYSYCTG
CAKCTGKYCYYTTYCCC--
 A C G T A C G T A C G T A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTGGCYCTTCYSYCTG------
--GCCTCCTCCMTCWGACTGKS
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CTGGCYCTTCYSYCTG
TTGGCA----------
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CTGGCYCTTCYSYCTG
--KGCCCTTCCCCA--
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.49
Offset:9
Orientation:forward strand
Alignment:CTGGCYCTTCYSYCTG-
---------CTGTCTGG
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCYCTTCYSYCTG
NTTGGCANN--------
 A C G T A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CTGGCYCTTCYSYCTG-
-------VBSYGTCTGG
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.46
Offset:5
Orientation:reverse strand
Alignment:CTGGCYCTTCYSYCTG------
-----NNTNNTGTCTGGNNTNG
 A T G C C G A T T A C G A T C G G T A C G A C T A G T C G A C T A C G T A G T C G A T C A T G C G A C T T A G C C G A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G