Information for 4-GCGGGCVTBCCGGCCT (Motif 6)

A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
Reverse Opposite:
T G C A A C T G A T C G A T G C A T G C A C T G A C T G T A G C G T C A A C G T A C T G A G T C A T G C A G T C A C T G A T G C
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.2 +/- 27.1bp
Average Position of motif in Background44.1 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGCVTBCCGGCCT
NCGCGGACGTTG------
 A C G T A C G T A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCGGGCVTBCCGGCCT
-GGGGATTTCC-----
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GCGGGCVTBCCGGCCT-
-------TTCCCGCCWG
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCGGGCVTBCCGGCCT
--GGGGATTCCCCC--
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGCVTBCCGGCCT
NGTGGGCAT--------
 A C G T A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---GCGGGCVTBCCGGCCT
TATGCGGGTA---------
 A C G T A C G T A C G T A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCGGGCVTBCCGGCCT
AAGGGGGCGTGGCC----
 A C G T A C G T A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
C T G A C T G A C T A G C A T G T C A G T C A G A T C G A G T C C A T G A C G T T C A G C A T G A G T C G T A C A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCGGGCVTBCCGGCCT
-----NYTTCCCGCC-
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCGGGCVTBCCGGCCT
-GGGAATTTCC-----
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCGGGCVTBCCGGCCT
-GGGGATTTCC-----
 A T C G A G T C A C T G A T C G C T A G A G T C T G C A A C G T A C T G A G T C G T A C T A C G A T C G A T G C A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T A C G T