Information for 1-AATGGCCCTG (Motif 4)

T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
Reverse Opposite:
T A G C G T C A A C T G C T A G A C T G A T G C A G T C C G T A C G A T A G C T
p-value:1e-11
log p-value:-2.603e+01
Information Content per bp:1.838
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif82.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets51.1 +/- 30.3bp
Average Position of motif in Background51.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATGGCCCTG
GTTAATGGCC---
 A C G T A C G T A C G T T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AATGGCCCTG
BNTGDCCTTG
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATGGCCCTG-
-AAGACCCYYN
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AATGGCCCTG--
--TGACCTTGAN
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATGGCCCTG--
--TGACCTTGAV
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AATGGCCCTG
--AGGCCTAG
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGGCCCTG
TAATGGCGGNC
 A C G T T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGGCCCTG
YAACBGCC---
 A C G T T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AATGGCCCTG
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATGGCCCTG-
NATGACCTTGA
 T C G A C G T A G C A T A C T G A T C G A G T C A G T C A G T C C A G T A C T G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A