Information for 15-GATATGACCT (Motif 40)

A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A G T C G T C A A C G T C T G A A C G T A G T C
p-value:1e-4
log p-value:-1.069e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets36.2 +/- 30.5bp
Average Position of motif in Background47.2 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GATATGACCT
----TGACCT
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GATATGACCT--
----TGACCTYA
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GATATGACCT----
----TGACCTTGAT
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GATATGACCT---
---ATGACCTTGA
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GATATGACCT---
--NATGACCTTGA
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GATATGACCT--
----TGACCYCT
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GATATGACCT------
NNNNATGACCTTGANTN
 A C G T A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GATATGACCT---
---NTGACCTTGA
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GATATGACCT----
---ATGACCTTGAA
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GATATGACCT------
NNNNTGACCTTTNNNN
 A C T G C G T A A G C T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A