Information for 18-CTKTGGGKYTTRT (Motif 26)

A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
Reverse Opposite:
C G T A A G C T C G T A C G T A C T A G G T C A A G T C A G T C A G T C C G T A G T C A C G T A A C T G
p-value:1e-9
log p-value:-2.081e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 29.0bp
Average Position of motif in Background72.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTKTGGGKYTTRT
GTCTGTGGTTT----
 A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTKTGGGKYTTRT
-TTTGCGGTTT--
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTKTGGGKYTTRT---
CGTTGGGGATTAGCCT
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTKTGGGKYTTRT
-NRRGGGTCTT--
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTKTGGGKYTTRT
NNHTGTGGTTWN---
 A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTKTGGGKYTTRT
GCTGTGGTTT----
 A C G T A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTKTGGGKYTTRT
-NNTGTGGTTT--
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CTKTGGGKYTTRT
--TTGCGGTTT--
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CTKTGGGKYTTRT
TGGACTTTGNNCTNTG-
 A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTKTGGGKYTTRT----
NNNTNGGGCGTATNNTN
 A G T C C G A T A C G T A C G T A C T G A C T G T A C G A C G T A G T C A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T