Information for 6-GAAMTGCCCTGCAGGG (Motif 8)

T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
Reverse Opposite:
A G T C G A T C A G T C C A G T A C T G A G T C C G T A A T C G T C A G C T A G G T A C G T C A C A G T C G A T G A C T A G T C
p-value:1e-13
log p-value:-3.159e+01
Information Content per bp:1.733
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.7 +/- 16.8bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG
---TTTCCCAGAAN--
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAMTGCCCTGCAGGG
GGAAATTCCC-------
 A C G T T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG
----CCCCCTGCTGTG
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG---
----TCNCCTGCTGNGNNN
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAMTGCCCTGCAGGG--
-AATCGCACTGCATTCCG
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG
----TTCCNGGAAG--
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG---
----TNTCCTGCTGTGNNG
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG----
-----DCHCAGCAGGRGGCC
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GAAMTGCCCTGCAGGG
----TGCCCAGNHW--
 T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAMTGCCCTGCAGGG
GGAAATTCCC-------
 A C G T T C A G C T G A G C T A G T C A A C G T A C T G G A T C A G T C A T G C A C G T A C T G T G A C G T C A C T A G C T A G T C A G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T