Information for 3-GTCACCCAACCAGTCY (Motif 5)

A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
Reverse Opposite:
C T A G C A T G C T G A A T G C C G A T A C T G A C T G A C G T A C G T C T A G C T A G A C T G A C G T A C T G C T G A T A G C
p-value:1e-14
log p-value:-3.291e+01
Information Content per bp:1.742
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 20.0bp
Average Position of motif in Background42.3 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCACCCAACCAGTCY
ATCACCCCAC------
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCACCCAACCAGTCY
CNGTCACGCCAC------
 A C G T A C G T A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCACCCAACCAGTCY
AGCCACTCAAG------
 A C G T A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCACCCAACCAGTCY
ATCACCCCAT------
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTCACCCAACCAGTCY
--CRCCCACGCA----
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTCACCCAACCAGTCY
ATCACCCCAT------
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCACCCAACCAGTCY
TBGCACGCAA-------
 A C G T A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTCACCCAACCAGTCY
NSCACTYVAV------
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GTCACCCAACCAGTCY------
--CCCCAAACCACCCCCCCCCA
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCACCCAACCAGTCY--
-CGACCCAATCAACGGTG
 A T C G A G C T A G T C G T C A A G T C A G T C G A T C C G T A C G T A G T A C G T A C C G T A A T C G G A C T G T A C G A T C A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G