Information for 13-TCTTAAGAAG (Motif 38)

A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
Reverse Opposite:
A G T C A G C T A C G T T G A C A C G T A C G T C G T A C G T A C T A G G T C A
p-value:1e-7
log p-value:-1.755e+01
Information Content per bp:1.837
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif150.0
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets48.8 +/- 28.1bp
Average Position of motif in Background49.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TCTTAAGAAG-
TTCTNNAGAANT
 A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G A C G T
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCTTAAGAAG--
ANTTCTCAGGAANNN
 A C G T A C G T A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCTTAAGAAG
TTCTNMGGAA-
 A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTTAAGAAG
--TTAATTAG
 A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTTAAGAAG
AGTCGTAAAAA-
 A C G T A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTTAAGAAG
GTCGTAAAAA-
 A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTTAAGAAG
ATATTAATTAA
 A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TCTTAAGAAG-
-----NGAAGC
 A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TCTTAAGAAG
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTTAAGAAG
GGTCGTAAAAA-
 A C G T A C G T A C G T A G T C A C G T G C A T G T C A G T C A A C T G C G T A C T G A T C A G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T