Information for 18-ACAAACAVATTAACAA (Motif 31)

C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G C G A T A G C T G T C A C G T A A C G T A C G T A C G T A T C G A C G T A C G T A C G T A C T G C G A T
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.800
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 34.2bp
Average Position of motif in Background40.0 +/- 37.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACAAACAVATTAACAA
AAAAACCAATTAAGAA
 C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAAACAVATTAACAA
CAAAACCAATTAATTT
 C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACAAACAVATTAACAA
AAAGTAAACAAAAATT---
 A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACAAACAVATTAACAA
CAAAAGTAAACAAAG------
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAAACAVATTAACAA---
AGTAAACAAAAAAGAACANN
 A C G T C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAAACAVATTAACAA
AAATAAACA---------
 A C G T A C G T C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACAAACAVATTAACAA
AAACAGACAAAGGAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAAACAVATTAACAA
AACAACCAATTAATTC
 C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAAACAVATTAACAA
NTAATBNAATTA----
 C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACAAACAVATTAACAA
ATAAACAATTAAACA-
 C G T A G T A C C G T A C G T A C G T A A T G C C G T A T G A C C G T A A C G T A C G T C T G A C G T A G T A C C G T A G T C A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T