Information for 17-GAGGTAAADCAGGVCA (Motif 29)

A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
Reverse Opposite:
A G C T C T A G A G T C A G T C G T A C A C G T A T C G G C A T A C G T A C G T C G A T C G T A A G T C G A T C C G A T A T G C
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.755
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.7 +/- 23.5bp
Average Position of motif in Background49.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGGTAAADCAGGVCA
-TGGAAAA--------
 A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGGTAAADCAGGVCA-
---GCAAAACATTACTA
 A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A A C G T
A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTAAADCAGGVCA
NATGGAAAAN-------
 A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAGGTAAADCAGGVCA
TAAAGTCGTAAAATAG----
 A C G T A C G T A C G T A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGTAAADCAGGVCA
TGACANARRCCAGRC--
 A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGTAAADCAGGVCA
NGYCATAAAWCH-----
 A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGGTAAADCAGGVCA
AAAAAGTAAACAAAGAC-
 A C G T A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GAGGTAAADCAGGVCA
TAAAGTCGTAAAACAT----
 A C G T A C G T A C G T A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTAAADCAGGVCA
AATGGAAAAT-------
 A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTAAADCAGGVCA
AATGGAAAAT-------
 A C G T A T C G C G T A C T A G A C T G C G A T C G T A C G T A C G T A C G T A A T G C C G T A A C T G A C T G T C A G G A T C C T G A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T