Information for 16-GTTGGTKTTRCYY (Motif 28)

A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
Reverse Opposite:
C T A G C T A G C T A G A G C T C G T A C G T A G T C A C G T A A G T C A G T C C G T A C G T A A G T C
p-value:1e-9
log p-value:-2.217e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.4 +/- 19.8bp
Average Position of motif in Background47.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTGGTKTTRCYY
GTTTGTT------
 A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTKTTRCYY
GTNTTGTTGTGANNT
 A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GTTGGTKTTRCYY
GAATGTTTGTTT-----
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGTKTTRCYY-
AGATGCTRCTRCCHT
 A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTTGGTKTTRCYY
NNNTGTTGTTGTTNG--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTTGGTKTTRCYY-
GCGGAGGTGTCGCCTC
 A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGGTKTTRCYY
CACGGCAGTTGGTNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTGGTKTTRCYY
RGTGGGYGTGGC--
 A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTTGGTKTTRCYY
-TGGGTGTGGC--
 A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTTGGTKTTRCYY--
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T C T G A A G T C A G T C A G T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G