Information for 10-TGTCTAACTACCC (Motif 22)

C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
Reverse Opposite:
A T C G C T A G A C T G A G C T C G T A T A C G A C G T A C G T C G T A A C T G C G T A A T G C C G T A
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.784
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.0 +/- 32.1bp
Average Position of motif in Background51.4 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VSX2/MA0726.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTCTAACTACCC
---CTAATTAG--
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T A C G T

VAX2/MA0723.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTCTAACTACCC
---CTAATTAC--
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTCTAACTACCC
---CTAATTAC--
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTAACTACCC
--NCTAATTA---
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTCTAACTACCC
---CTAATTAT--
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T A C G T A C G T

EMX2/MA0886.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTCTAACTACCC
--NCTAATTANN-
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TGTCTAACTACCC
--GCTAATTAAC-
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTCTAACTACCC
TWGTCTGV------
 A C G T C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTAACTACCC-
NTGAGCTAATTACCNT
 A C G T A C G T C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C A C G T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTCTAACTACCC
--TCTAATTAAA-
 C G A T A T C G A C G T A G T C C G A T G T C A C G T A A T G C C G A T C T G A A G T C G A T C T A G C
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A A C G T