Information for 8-GTAAATATTTCCA (Motif 21)

C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A T C G G T C A C T G A C G T A A C G T C T G A C G A T A C G T C A G T T C G A A G T C
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.804
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets30.4 +/- 15.5bp
Average Position of motif in Background51.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTAAATATTTCCA--
-CTAATATTGCTAAA
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTAAATATTTCCA--
-CTAATATTGCTAAA
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTAAATATTTCCA
TATGTAAATAT-----
 A C G T A C G T A C G T C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTAAATATTTCCA
TATGTAAATAT-----
 A C G T A C G T A C G T C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTAAATATTTCCA---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTAAATATTTCCA
WAAGTAAAYA------
 A C G T A C G T A C G T C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:GTAAATATTTCCA---
------ATTTGCATAA
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTAAATATTTCCA---
---TTCATTTGCATAT
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAAATATTTCCA
GTAAACA------
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTAAATATTTCCA
GTAAACA------
 C T A G A C G T G T C A C G T A C G T A A G C T C G T A A C G T A G C T A C G T A T G C A G T C C G T A
T C A G G C A T T G C A G T C A C G T A G A T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T