Information for 4-CTGGATAAAC (Motif 2)

T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
Reverse Opposite:
C T A G A G C T G C A T G C A T C G T A A G C T G T A C G T A C C G T A A C T G
p-value:1e-34
log p-value:-7.916e+01
Information Content per bp:1.656
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif15.56%
Number of Background Sequences with motif1898.6
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets51.1 +/- 24.0bp
Average Position of motif in Background50.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGGATAAAC
-TGGAAAA--
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGGATAAAC
AATGGAAAAT-
 A C G T T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGGATAAAC--
WWATRTAAACAN
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C A C G T A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGGATAAAC
NATGGAAAAN-
 A C G T T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGATAAAC
-NGGATTAN-
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGGATAAAC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGGATAAAC
--GGATTAGC
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGATAAAC
AATGGAAAAT-
 A C G T T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGGATAAAC-
----GTAAACA
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C A C G T
A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

FOXG1/MA0613.1/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTGGATAAAC--
----GTAAACAA
 T G A C G C A T C A T G C A T G T C G A G C A T C G T A C G T A T C G A G A T C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A