Information for 7-GGCTRATTTAMCY (Motif 18)

A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A C G T C G T A C G T A C G T A A C G T A G C T C G T A A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.563e+01
Information Content per bp:1.892
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 26.8bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0174.1_Vax1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRATTTAMCY
CTNNGNTAATTAACNT
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRATTTAMCY
NTNNGCTAATTANCNT
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

LHX2/MA0700.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTRATTTAMCY
-ACTAATTAAC--
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T T C G A A G T C G A C T G T C A C T G A A C G T A C G T C T G A C T G A A T G C A C G T A C G T

PH0131.1_Pax4/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCTRATTTAMCY-
NNGNGCTAATTAGNTNA
 A C G T A C G T A C G T A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCTRATTTAMCY-----
-ACTTAGTTAACTAAAAA
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

MIXL1/MA0662.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTTAMCY
-NNTAATTANN--
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCTRATTTAMCY
-GCTAATTGGC--
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T T C A G G A T C C G A T C T G A T C G A A C G T A G C T C T A G T C A G G A T C A C G T A C G T

NOTO/MA0710.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGCTRATTTAMCY
-GCTAATTAGC--
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C A C G T A C G T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCTRATTTAMCY
-NCTAATTAANN-
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCTRATTTAMCY
--CTAATTAA---
 A C T G C T A G A G T C A C G T C T G A C G T A A C G T A C G T A C G T C G T A T G A C A G T C A G C T
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T