Information for 11-GGAAAGCAAT (Motif 32)

A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif13.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets31.6 +/- 26.5bp
Average Position of motif in Background44.5 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGAAAGCAAT
HNRAATCAAT
 A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGCAAT
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGAAAGCAAT
-GTAAACAAT
 A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAGCAAT
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGAAAGCAAT
---NAACAAT
 A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGAAAGCAAT
ACTGAAACCA--
 A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAGCAAT
TGGAAAA----
 A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAAAGCAAT--
--TAATCAATTA
 A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

PH0007.1_Barx1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAAAGCAAT--------
--AAAGTAATTAGTGAAT
 A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGAAAGCAAT---
AAAAAATCAATAAT
 A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T