Information for 9-AAAGGTTCTAAATDAT (Motif 24)

G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
Reverse Opposite:
C T G A A C G T G A C T C G T A A G C T A C G T A C G T C G T A C A T G C G T A G T C A A G T C A G T C A G C T A C G T A C G T
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 23.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
CTAAGGTTCTAGATCAC
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGGTTCTAAATDAT
-AGNGTTCTAATGANN
 G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
A C G T G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PH0012.1_Cdx1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGGTTCTAAATDAT
TAAGGTAATAAAATTA
 G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0013.1_Cdx2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGGTTCTAAATDAT
AAAGGTAATAAAATTT
 G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
GATAGGGTATCACTAAT
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
GATAGGGTATCACTAAT
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAAGGTTCTAAATDAT
---NGYCATAAAWCH-
 G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
AATAGGGTATCAATTAT
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
AATAGGGTATCATATAT
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAAGGTTCTAAATDAT
AATAGGGTATCAATATT
 A C G T G T C A G T C A C T G A A C T G C T A G A C G T A C G T G T A C A C G T C G T A C G T A C T G A C G A T C A G T G T C A G A C T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T