Information for 5-CAAGGAGAAGCCT (Motif 12)

A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C G T A G C T A G T C A C G T A G T C A G T C A C G T C G A T A C T G
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 30.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAAGGAGAAGCCT
CAAGGHCANV---
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAAGGAGAAGCCT
-----NGAAGC--
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAAGGAGAAGCCT
--GGGAGGACNG-
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAAGCCT
BTCAAGGTCA-----
 A C G T A C G T A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAAGCCT
NTCAAGGTCA-----
 A C G T A C G T A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:6
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGGAGAAGCCT
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C G T A C G T A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CAAGGAGAAGCCT---
-NNGGCCACGCCTTTN
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T A C G T A C G T A C G T
A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CAAGGAGAAGCCT-
-------AAGCTTG
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CAAGGAGAAGCCT--
-------AGGCCTNG
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAAGGAGAAGCCT--
--AGGGGAATCCCCT
 A G T C G C T A C G T A A C T G A C T G C G T A A C T G C T G A C G T A A C T G A G T C A G T C C G A T A C G T A C G T
A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T