Information for 20-MTAATCTTAGATT (Motif 23)

T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C T G C G T A A C G T A C G T C G T A A C G T
p-value:1e-5
log p-value:-1.325e+01
Information Content per bp:1.927
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 14.6bp
Average Position of motif in Background62.9 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:MTAATCTTAGATT
YTAATCCY-----
 T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:MTAATCTTAGATT
TTAATCCT-----
 T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MTAATCTTAGATT
TNTTATCTTATCTT
 A C G T T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-MTAATCTTAGATT
GCTAATCC------
 A C G T T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:MTAATCTTAGATT--
-----CNGTGATTTN
 T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-MTAATCTTAGATT
TCTATTTTTAGA--
 A C G T T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MTAATCTTAGATT
CCTAATCCGC----
 A C G T T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-MTAATCTTAGATT
NYTAATCCYB----
 A C G T T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MTAATCTTAGATT
TTAATCCG-----
 T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:MTAATCTTAGATT-
---TGCTGTGATTT
 T G C A G C A T C G T A C G T A A C G T A G T C A C G T C G A T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T