Information for 8-CAGGTCATWYTGACCT (Motif 8)

G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
Reverse Opposite:
C G T A C A T G C T A G A G C T A G T C C G T A T C A G C G A T T C G A A C G T A C T G C G T A A G T C G T A C A C G T C A T G
p-value:1e-16
log p-value:-3.748e+01
Information Content per bp:1.775
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.8 +/- 28.1bp
Average Position of motif in Background45.7 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR1/MA0112.3/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CAGGTCATWYTGACCT-
CAGGTCACCGTGACCTT
 G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CAGGTCATWYTGACCT
NAGGTCACNNTGACC-
 G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:forward strand
Alignment:CAGGTCATWYTGACCT
-AGGTCACCCTGACCT
 G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CAGGTCATWYTGACCT---
GTAGGTCACGGTGACCTACT
 A C G T G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAGGTCATWYTGACCT
-AGGTCA---------
 G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGGTCATWYTGACCT
TRAGGTCA---------
 A C G T G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGGTCATWYTGACCT
ATCAAGGTCA---------
 A C G T A C G T A C G T G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAGGTCATWYTGACCT
AAGGTCAC--------
 G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGGTCATWYTGACCT
TCAAGGTCAT--------
 A C G T A C G T G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTCATWYTGACCT
TCAAGGTCAN--------
 A C G T A C G T G A T C C G T A A C T G C T A G A C G T A G T C C G T A A G C T G C T A A G T C A C G T A C T G C T G A A G T C G T A C A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T