Information for 13-GGATAAAAGC (Motif 41)

A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.213e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 4.3bp
Average Position of motif in Background45.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGATAAAAGC-----
GTATAAAAGGCGGGG
 A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGATAAAAGC-----
GTATAAAAGGCGGGG
 A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGATAAAAGC----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGATAAAAGC----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

GATA5/MA0766.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGATAAAAGC
AGATAAGA--
 A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGATAAAAGC--
AAAGATCAAAGGAA
 A C G T A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGATAAAAGC
NGGATTAN---
 A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGATAAAAGC
AGATAAGA--
 A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGATAAAAGC
GNCTATAAAAGG
 A C G T A C G T A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGATAAAAGC
--ATTAAA--
 A C T G A C T G C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C
A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T