Information for 25-GGCACGTTTTTTT (Motif 40)

A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A C G T A C G T A C G T A A G T C A C T G A C G T A C T G A G T C A G T C
p-value:1e-6
log p-value:-1.420e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.7 +/- 16.0bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTTTTTT
-GCACGTAY----
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTTTTTT-----
-NNNNTTTTTTTTTNAAC
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTTTTTT-----
-GNATTTTTTTTTTGANC
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGCACGTTTTTTT------
-----TTTTTTTTCNNGTN
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCACGTTTTTTT
-GAATGTTTGTTT
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTTTTTT
BGCACGTA-----
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTTTTTT-
-GCACGTGTCNNNN
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCACGTTTTTTT
-GCACGTNC----
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCACGTTTTTTT
-GCACGTACCC--
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCACGTTTTTTT
AACACGTGTT---
 A C T G A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T A C G T