Information for 24-RARVCARAAGSAA (Motif 39)

T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A
Reverse Opposite:
C G A T A G C T T A C G G A T C A G C T A G C T G A T C A C G T A T C G A G T C A G T C A C G T A G C T
p-value:1e-6
log p-value:-1.431e+01
Information Content per bp:1.713
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif58.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets45.8 +/- 27.1bp
Average Position of motif in Background49.9 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RARVCARAAGSAA--
-----ANCAGGAAGT
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-RARVCARAAGSAA----
WNAGTCADAVTGAAACTN
 A C G T T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:RARVCARAAGSAA--
-----AVCAGGAAGT
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:RARVCARAAGSAA
------AGAGGAA
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RARVCARAAGSAA
AAAACAAAGG---
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:RARVCARAAGSAA----
-----NDCAGGAARTNN
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RARVCARAAGSAA--
BAGTCATANTGAAAG
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--RARVCARAAGSAA
TCGAAACCGAAACT-
 A C G T A C G T T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.50
Offset:6
Orientation:forward strand
Alignment:RARVCARAAGSAA---
------AGAGGAAGTG
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:RARVCARAAGSAA--
-----ACVAGGAAGT
 T C G A C G T A C T A G T C A G A T G C T G C A C T A G C T G A C T G A C T A G A T G C C T G A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T