Information for 10-AAHGTCATAT (Motif 38)

C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
Reverse Opposite:
C G T A A C G T T C G A A G C T A C T G G T C A A G T C C T G A A C G T A C G T
p-value:1e-7
log p-value:-1.775e+01
Information Content per bp:1.829
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.08%
Number of Background Sequences with motif559.9
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets52.5 +/- 27.0bp
Average Position of motif in Background51.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrrg/MA0643.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAHGTCATAT
TCAAGGTCAT--
 A C G T A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAHGTCATAT
TCAAGGTCATA-
 A C G T A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAHGTCATAT--
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAHGTCATAT
TCAAGGTCAN--
 A C G T A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAHGTCATAT---
---GACATATGTT
 C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAHGTCATAT
-ACGTCA---
 C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAHGTCATAT
AAAAGTCAA--
 A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAHGTCATAT---
--GGTCACATGAC
 C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AAHGTCATAT
ANGNAAAGGTCA---
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAHGTCATAT---
---GTCACATGAY
 C G T A G T C A G A C T A C T G A C G T G T A C C T G A A G C T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C