Information for 7-GCCTCAGGGC (Motif 29)

A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C
Reverse Opposite:
T A C G A T G C G A T C G A T C C G A T A T C G C G T A C T A G A C T G T A G C
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.456
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.47%
Number of Background Sequences with motif1292.7
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets57.1 +/- 26.1bp
Average Position of motif in Background50.0 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GCCTCAGGGC--
GCCTCAGGGCAT
 A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GCCTCAGGGC--
SCCTSAGGSCAW
 A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGGC--
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGGC
CGCCTCAGGCA
 A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGGC
AGCCTCAGGCA
 A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GCCTCAGGGC
AGCCTCAGGCA
 A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGGC--
NTCGCCTCAGGCAAT
 A C G T A C G T A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GCCTCAGGGC--
TTGCCCTAGGGCAT
 A C G T A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GCCTCAGGGC--
TCACCTCTGGGCAG
 A C G T A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGGGC--
NTCCCCTCAGGGANT
 A C G T A C G T A C G T A T C G T G A C G A T C G C A T T A G C G C T A C A T G C T A G T A C G A T G C A C G T A C G T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T