Information for 17-CAATCTAAGATTATVT (Motif 26)

A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
Reverse Opposite:
C G T A A T C G T G C A G A C T T C G A C G T A G A C T G A T C C G A T G C A T C G T A A C T G C G T A C G A T A C G T A C T G
p-value:1e-10
log p-value:-2.473e+01
Information Content per bp:1.649
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif237.5
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets54.7 +/- 21.7bp
Average Position of motif in Background50.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAATCTAAGATTATVT
CCAATCAA---------
 A C G T A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAATCTAAGATTATVT
CCATCAATCAAA--------
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAATCTAAGATTATVT
CAAATCACTG-------
 A C G T A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAATCTAAGATTATVT
-AAGATAAGATAACA-
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAATCTAAGATTATVT
------RGGATTAR--
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CAATCTAAGATTATVT-----
-----TAAGATTATAATACGG
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAATCTAAGATTATVT
-AAACAAACATTC---
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CAATCTAAGATTATVT
------NGGATTAA--
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAATCTAAGATTATVT
-ATGCTAAAAATAGAA
 A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
A C G T C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Hmx2/MA0897.1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----CAATCTAAGATTATVT
ACAAGCAATTAAAGAAT----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A G A C T G T A C G A C T C G T A C G T A C T A G C T G A C G A T A C G T C T G A A C G T T A G C C G A T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T A C G T A C G T A C G T A C G T