Information for 19-TCAGATGGCCDGG (Motif 24)

C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
Reverse Opposite:
G T A C A G T C G C T A A C T G A C T G A T G C A G T C C G T A G A C T A G T C A C G T A C T G C G T A
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.845
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 25.5bp
Average Position of motif in Background53.9 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TCAGATGGCCDGG
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCAGATGGCCDGG
AACAGATGGC----
 A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCAGATGGCCDGG
AACAGATGGT----
 A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCAGATGGCCDGG
TCACGTGACCGG-
 C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGATGGCCDGG
VNAVCAGCTGGC----
 A C G T A C G T A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCAGATGGCCDGG
NNCAGGTGNN----
 A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAGATGGCCDGG
AACAKATGGY----
 A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGATGGCCDGG
GKVTCADRTTWC----
 A C G T A C G T A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCAGATGGCCDGG
GGTCACGTGGC----
 A C G T A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCAGATGGCCDGG
NNVVCAGCTGBN----
 A C G T A C G T A C G T C G A T A G T C C G T A A C T G C T G A A C G T C T A G A T C G A G T C A G T C C A G T A C T G A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T